WORKSHOP 1: SOFTWARE TOOLS FOR BIOFOUNDRIES

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What:
Workshop
When:
9:20 AM, Saturday 15 Oct 2022 (2 hours 40 minutes)
Breaks:
Coffee Break   11:00 AM to 11:20 AM (20 minutes)
Break: Group Photo   11:00 AM to 11:20 AM (20 minutes)
Lunch and Tours of Concordia Foundry   12:00 PM to 01:00 PM (1 hour)

Animated by: Jean Peccoud (Colorado State University)

9:20 - 11:00 

  • Evelyn Travnik (The Novo Nordisk Foundation Center for Biosustainability)  
    Lifelike – a graph-powered knowledge consolidation and mining platform tailored to biological sciences
  • Jean Peccoud (Colorado State University) 
    Development of software to license plasmids like software
  • Timothy McCubbin (Australian Institute for Bioengineering and Nanotechnology)  
    High-throughput rational design of strains leveraging multi-omics data sets
  • Sung Cheon Ko & Dong Jae Kim (SKy Biofoundry, Sungkyunkwan University) 
    Biofoundry Palette and its application for the biofoundy workflow: DNA assembly and deep learning framework
  • Jing Wui Yeoh (SynCTI, Singapore BioFoundry, NUS)  
    A unified modelling tool to enable model-driven engineering design cycle for biofoundry

11:00-11:20 Group photo and break

11:20-12:00 Group discussion on needs/gaps, standardization, sharing, biosecurity

Jean Peccoud
Chair

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